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Aura HD Getting started: Syncing notes etc

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Hi!
I just ordered an Aura HD, my first Kobo device. :thumbsup:

I've been reading and searching the forum, sorry if it's already been answered ... I was reading this http://www.mobileread.com/forums/sho...d.php?t=154643 and browsed the FAQ and more.

To sideload books, Calibre should work just fine from what I read. Do I need to install a plugin manually, or is it bundled in Calibre?
How about these notes, highlights and bookmarks?
Will they be automatically fetched and added to the book metadata in Calibre upon syncing?

So that when I've read and annotated a book on the Aura, I sync with Calibre and from within Calibre I'll be able to copy my notes and highlights into my academic papers or whatever I'm writing?

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